Help & FAQ

Everything you need to know about peptide verification and understanding your certificate

Updated: September 2026

General

Genecore Laboratories provides independent third-party testing for research peptides, offering HPLC purity analysis, LC-MS identity confirmation, and LAL endotoxin testing, each issued as a QR-verified digital certificate.

Suppliers and manufacturers documenting batch quality, research labs verifying incoming material, and individual researchers who want independent confirmation of what they've been sent.

Our certificates document analytical results (purity, identity, and endotoxin data) using established methods, but they are not a GMP release certificate. They're intended for research use and independent verification, not regulatory batch release.

Verification & Security

Enter the reference code printed on the certificate into our Verify page, or scan the QR code directly. The record loads straight from our database, so you're seeing the original result, not a copy someone could have edited.

A PDF can be edited, but the reference code and QR always point back to our live database record. If the numbers on a printed certificate don't match what the lookup shows, treat the printed copy as unverified.

Process

Place an order for the tier you need, then post your sample to our laboratory partner with the shipping instructions provided at checkout. You'll get order tracking and an email when your certificate is ready.

Technical

HPLC separates the compounds in your sample and measures purity as a percentage of the total signal. LC-MS goes further, measuring the actual molecular weight of what's present to confirm identity, not just purity.

Peptide Purity Index (PPI) looks at spectral consistency across a single peak. Sample Composition (Area%) measures what portion of the total UV-detectable signal belongs to your target peptide. They answer different questions and both matter.

Identity testing runs on a Shimadzu LCMS-8040 triple quadrupole system with ESI+ ionization, giving intact-mass confirmation across the charge-state ladder.

Purity analysis runs on a Nexera XR HPLC system with diode-array detection, using a Zorbax Extend C18 column.

Mass spectrometers respond differently to different compounds, so peak height on MS doesn't reliably represent relative quantity. HPLC's UV detector gives a much more consistent, comparable purity measurement.

This is often an adduct (the peptide bound to a sodium or potassium ion) or a dimer (two molecules briefly stuck together during ionization), not extra mass on the actual peptide. Our analysts account for this when confirming identity.

These are typically related impurities, degradation products, or synthesis by-products present in small amounts. They're reported as part of your total impurity percentage on the certificate.

Interpreting Results

A strong, clean HPLC peak only tells you the sample is chromatographically pure — not what it actually is. LC-MS is what confirms the molecular identity separately.

We use diode-array detection, which records the full UV spectrum rather than a single fixed wavelength, so this isn't typically a source of error in our results.

Purity measures how clean the sample is, not what it is. A sample can be 99% chemically pure while being 99% pure of the wrong compound. That's exactly why identity testing (LC-MS) is a separate step from purity testing (HPLC).

Different compounds can share a similar retention time under the same method. It's a useful indicator, but only mass-based identity confirmation (LC-MS) actually verifies what a compound is.

Yes. This happens when the dominant compound in the sample is not the expected peptide, even though it's chromatographically clean. It's one of the main reasons combined testing exists.

It's possible for some compounds under certain conditions. Our analysts check for this and adjust ionization parameters where appropriate before reporting a result as unconfirmed.

No. Molecular weight is a fixed property of the compound itself. HPLC method changes can affect retention time and separation, but not the mass measured by LC-MS.

Supplier certificates are typically self-reported and not independently verified. Independent testing exists precisely to check that claim against a result nobody involved in the sale generated.

No. "Not confirmed" means the evidence we obtained doesn't sufficiently support the expected identity — it isn't proof of absence. See the summary box below for exact definitions.

Not without further targeted analysis. Standard testing identifies whether your target peptide is present and how pure the sample is — it doesn't unravel every unidentified peak into a specific compound.

The short version. Confirmed means the evidence supports the expected identity. Not confirmed means the evidence obtained doesn't sufficiently support it. Purity is the target peptide's share of the total UV area (or Peak Purity Index on a single peak), under the stated method. Unknown peak is detected material that hasn't necessarily been identified. We report against these definitions consistently, on every certificate.

Submitting a sample? Place an order to send in a sample and receive an independent certificate of analysis. View pricing →

Understanding Your Certificate

Your certificate leads with the headline results: HPLC purity, LC-MS identity verdict, and (if ordered) the endotoxin result — each shown with a pass/fail and the underlying number.

The chromatogram shows the raw HPLC trace: retention time on the x-axis, detector response on the y-axis. Your main peak's position and area are what purity is calculated from.

This confirms the instrument itself was performing correctly at the time of your run — resolution, tailing factor, and theoretical plates all within acceptable limits.

For multi-component blends, purity is reported per identified peak rather than as a single combined number, so you can see the composition of each component separately.

Glossary of Key Terms

Peptide Purity (PPI)

Peak Purity Index assesses spectral homogeneity across the chromatographic peak, using PDA data taken at the peak's front, apex, and tail. A consistent UV spectrum across the peak is evidence it's a single compound rather than two things co-eluting under one shape. This tells you how clean the peak itself looks, not how much of the sample is peptide.

Sample Composition (Area %)

Shows what portion of the UV-detectable sample corresponds to your target peptide. Calculated from chromatographic peak areas (main peak area ÷ total peak area). Important: this only measures UV-visible compounds. Lower values usually indicate other UV-visible peptide impurities or related compounds are present. Non-UV fillers like mannitol, salts, and sugars are not detected by this method and do not affect this percentage. Typical range: 85-99%+.

Mass accuracy

The gap between the expected and the observed molecular weight. This is a unit-resolution instrument, so identity is assessed against an absolute window of roughly ±1 Da rather than a parts-per-million figure, alongside two further requirements: the ion has to dominate the spectrum, and its isotope spacing has to match the assigned charge. Parts-per-million-level mass accuracy is a high-resolution measurement concept, and this method does not claim it.

Resolution (Rs)

Measures separation between peaks. Higher values mean better separation. Shows "N/A" when only one peak is detected (excellent — indicates no impurities to separate from).

Tailing Factor (T)

Measures peak symmetry. Values near 1.0 are ideal. Values >2.5 suggest peak distortion. Acceptance limit: ≤2.5.

Theoretical Plates (N)

Indicates column efficiency and peak sharpness. Higher values mean better performance. Acceptance limit: ≥1000 plates.

Retention Time (RT)

The time from injection to peak detection, measured in minutes. Used to identify compounds and check chromatographic consistency.

HPLC

High-Performance Liquid Chromatography — Analytical technique that separates compounds in a mixture using a liquid mobile phase and a solid stationary phase. Used to measure peptide purity.

LC-MS

Liquid Chromatography-Mass Spectrometry — Combined technique that separates compounds (LC) and then measures their molecular weight (MS). Used to confirm peptide identity.

Still have questions? Contact us at info@genecorelaboratories.com or visit our contact page.